BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E05SP1|AL427328
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1494 1751 0.0
>3x_Contig1494
Length = 10561
Score = 1751 bits (865), Expect = 0.0
Identities = 931/970 (95%), Gaps = 3/970 (0%)
Strand = Plus / Plus
Query: 1 atttgaatttngagacgtattggtctgcttgattagcaaaattcgtcaatrtttcgtttg 60
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1044 atttgaatttggagacgtattggtctgcttgattagcaaaattcgtcaatgtttcgtttg 1103
Query: 61 ctggatcagggccaatagagaaagaagggttagaattggaattagagttagcgccacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 ctggatcagggccaatagagaaagaagggttagaattggaattagagttagcgccacttt 1163
Query: 121 caagttgttgtggggtcacttgagcctggggaggagtagaggcgattktctgttgagttt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1164 caagttgttgtggggtcacttgagcctggggaggagtagaggcgattgtctgttgagttt 1223
Query: 181 gctcttcagtttggtgttgttgcygcygcygttgcytagaggcagcctccgcsgcggcga 240
||||||||||||||||||||||| || || ||||| |||||||||||||||| |||||||
Sbjct: 1224 gctcttcagtttggtgttgttgctgctgctgttgcttagaggcagcctccgcggcggcga 1283
Query: 241 cagtggcagcggctacttggtcgtcgaaagtagcatttgtattgatttgtgggtcaccga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 cagtggcagcggctacttggtcgtcgaaagtagcatttgtattgatttgtgggtcaccga 1343
Query: 301 tttgatggaaatccaagawctcggaatacatcattacacgccaggtgtcaacaggtaagt 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 tttgatggaaatccaagatctcggaatacatcattacacgccaggtgtcaacaggtaagt 1403
Query: 361 cagcatcgttgaaattccaatcaaacttagcttctgcsataggttcgtcggttgggtcat 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1404 cagcatcgttgaaattccaatcaaacttagcttctgcgataggttcgtcggttgggtcat 1463
Query: 421 gawatggggaaargtaaggatgggccaaggcatcagctgctgtaattctcttctttggat 480
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 gatatggggaaaggtaaggatgggccaaggcatcagctgctgtaattctcttctttggat 1523
Query: 481 cgaacacaagcattttttctagaagatctatagcatctggttccaagttctggaacctcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 cgaacacaagcattttttctagaagatctatagcatctggttccaagttctggaacctcg 1583
Query: 541 aactgaatggtacaggatctctatgaggtaatgaagtaacaaatttgagagtgttctctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 aactgaatggtacaggatctctatgaggtaatgaagtaacaaatttgagagtgttctctg 1643
Query: 601 agcaaatagtgtctatgasatcttttgggaggggatsstaatagatsagtgatgatagar 660
|||||||||||||||||| ||||||| ||||| ||| |||||||| ||||||||||||
Sbjct: 1644 agcaaatagtgtctatgacatctttt-ggaggcgatcctaatagatcagtgatgatagaa 1702
Query: 661 aattgatgsasgtgatstttasstgggaacaaaggcttaccctcgatcatttcggsaaag 720
|||||||| | ||||| |||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1703 aattgatgcacgtgatctttacctgggaacaaaggcttaccctcgatcatttcggcaaag 1762
Query: 721 atacaaccagsagaccagatgtctasttsaacattatatttttgcsaggtcaacatgatt 780
|||||||||| |||||||||||||| || |||||||||||||||| ||||||||||||||
Sbjct: 1763 atacaaccagcagaccagatgtctacttcaacattatatttttgccaggtcaacatgatt 1822
Query: 781 tctggggstctatagtaacgggttgacacgtaaccagtcatttgaggatcttgaatccta 840
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 tctggggctctatagtaacgggttgacacgtaaccagtcatttgaggatcttgaatccta 1882
Query: 841 gcaagtccgaaatcgcagatcttttaaatcacagttctcattgatcaagatattggaagg 900
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 gcaagtccgaaatcgcagatc-tttaaatcacagttctcattgatcaagatattggaagg 1941
Query: 901 tttcaaatctctaatggwyacacstgcggaatgaacgtatttaag-cccctcaagatctg 959
||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 1942 tttcaaatctctatggatcacacctgcggaatgaacgtatttaagccccctcaagatctg 2001
Query: 960 gtataaraaa 969
|||||| |||
Sbjct: 2002 gtataagaaa 2011
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5414
Number of Sequences: 1807
Number of extensions: 5414
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)